Information for 11-CTGTCTGCGG (Motif 16)

A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G
Reverse Opposite:
A G T C A T G C A C T G A T G C C G T A T C A G C G T A A T G C C G T A A C T G
p-value:1e-8
log p-value:-2.024e+01
Information Content per bp:1.820
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif313.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets43.1 +/- 21.5bp
Average Position of motif in Background49.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCGG
CTGTCTGG--
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGCGG
VBSYGTCTGG--
 A C G T A C G T A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGTCTGCGG---
---TTTGCGGTTT
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCGG
TWGTCTGV--
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGTCTGCGG---
----TTGCGGTTT
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTCTGCGG---
-TGTCAGGGGGCG
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGTCTGCGG---
--GTCTGTGGTTT
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGCGG-
SCTGTCARCACC
 A C G T A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGCGG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGTCTGCGG---
---TATGCGGGTA
 A G T C C G A T T A C G G C A T A G T C C G A T A T C G A G T C T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A