Information for 5-CACGTGCTGGGCTGCG (Motif 12)

A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
Reverse Opposite:
T A G C A C T G A G T C G T C A A T C G A T G C A G T C A G T C C G T A A C T G A G T C C T G A A T G C A T C G A C G T A T C G
p-value:1e-10
log p-value:-2.411e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 26.0bp
Average Position of motif in Background52.3 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT/MA0825.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGTGCTGGGCTGCG
ACCACGTGCC--------
 A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGCTGGGCTGCG
TCACGTGC---------
 A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACGTGCTGGGCTGCG
CACGTGNT--------
 A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACGTGCTGGGCTGCG
NGKCACGTGM---------
 A C G T A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGTGCTGGGCTGCG
ACCACGTGCT--------
 A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGCTGGGCTGCG
ACACGTGC---------
 A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGCTGGGCTGCG
NACACGTGCN--------
 A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACGTGCTGGGCTGCG
CACGTGBN--------
 A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGCTGGGCTGCG
GTCACGTGAN--------
 A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGTGCTGGGCTGCG
GNCACGTG----------
 A C G T A C G T A T G C G T C A A T G C A T C G A G C T A C T G A G T C C G A T A C T G A C T G A T C G A T G C A C G T A C T G A G T C A C T G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T