Information for 9-AAGGAGAGCTAGG (Motif 11)

C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C T G G T A C A C G T A G T C A C G T A G T C A G T C C G A T A G C T
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 27.1bp
Average Position of motif in Background63.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGAGAGCTAGG--
AAGGKGRCGCAGGCA
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAGGAGAGCTAGG
AAGGATATNTN--
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAGGAGAGCTAGG
TTGACCGAGAATTCC-
 A C G T A C G T A C G T C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAGGAGAGCTAGG-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGGAGAGCTAGG---
----AGGTCAAGGTCA
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AAGGAGAGCTAGG-----
---AAGTTCAAGGTCAGC
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AAGGAGAGCTAGG----
--AAAGATCAAAGGGTT
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

ZNF263/MA0528.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AAGGAGAGCTAGG-------
GGAGGAGGAGGGGGAGGAGGA
 A C G T C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AAGGAGAGCTAGG---
----AGGTCAAGGTCA
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AAGGAGAGCTAGG----
-NNAGGGACAAGGGCNC
 C T G A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C