Information for 4-GTCTCCTAGCAAC (Motif 5)

C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C
Reverse Opposite:
A T C G C G A T A G C T T C A G A G T C A G C T C T G A T C A G T A C G G T C A C T A G G T C A A G T C
p-value:1e-19
log p-value:-4.378e+01
Information Content per bp:1.722
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif102.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.1 +/- 21.7bp
Average Position of motif in Background52.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GTCTCCTAGCAAC-
TGTTKCCTAGCAACM
 A C G T C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.82
Offset:3
Orientation:forward strand
Alignment:GTCTCCTAGCAAC--
---SCCTAGCAACAG
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GTCTCCTAGCAAC---
-CCGCATAGCAACGGA
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTCTCCTAGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTCTCCTAGCAAC---
-TACCATAGCAACGGT
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCTCCTAGCAAC
GTTGCCATGGCAAC
 A C G T C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCTCCTAGCAAC---
-TACCCTAGTTACCGA
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T A C G T
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTCTCCTAGCAAC
-TTTCCTGGAAA-
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCTCCTAGCAAC---
-TTTCCTGGAAAGNNN
 C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C A C G T A C G T A C G T
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCCTAGCAAC
NNNTTTCCTGGAAA-
 A C G T A C G T C T A G A C G T A G T C A C G T A G T C A G T C G A C T C T G A A C T G A G T C C T G A C G T A A T G C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T