Information for 11-TCACGTGTGAGGGGCG (Motif 25)

A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A G T C A G T C A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 5.3bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGTGAGGGGCG
GGTCACGTGC--------
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACGTGTGAGGGGCG
GCACGTGT--------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCACGTGTGAGGGGCG
TCACGTGC--------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGTGAGGGGCG
GHCACGTG---------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCACGTGTGAGGGGCG-----
-----NNTNAGGGGCGGNNNN
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGTGAGGGGCG
GNCACGTG---------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACGTGTGAGGGGCG
-CACGTGBN-------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGTGAGGGGCG
GTCACGTGNT-------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCACGTGTGAGGGGCG
-CACGTG---------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGTGAGGGGCG
GGTCACGTGG--------
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A C T G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T