Information for 12-CCGCAAAGCT (Motif 18)

A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
Reverse Opposite:
C G T A A C T G A G T C A G C T A G C T A G C T A C T G A G T C C T A G A C T G
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.847
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif132.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets50.4 +/- 32.1bp
Average Position of motif in Background52.2 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCGCAAAGCT
AAACCGCAAA---
 A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGCAAAGCT
AAACCGCAA----
 A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCGCAAAGCT--
-----AAGCTTG
 A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGCAAAGCT
ACATCAAAGG-
 A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAAAGCT
AAACCACAGAN--
 A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAAAGCT
TACCCGCATN---
 A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCGCAAAGCT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCGCAAAGCT-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGCAAAGCT
ACWTCAAAGG-
 A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CCGCAAAGCT
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C T C A G A G T C C T G A C T G A C T G A C T A G A G T C G C A T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T