Information for 9-GCCTCCBGGATGGCAG (Motif 16)

A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
Reverse Opposite:
A G T C A G C T A C T G T G A C A T G C G T C A A C G T A G T C A G T C T A G C A C T G A C T G G T C A A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 23.4bp
Average Position of motif in Background40.4 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCTCCBGGATGGCAG-
-----CAAGATGGCGGC
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCCTCCBGGATGGCAG-
-----CAAGATGGCGGC
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCCTCCBGGATGGCAG
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCBGGATGGCAG---
TGGCCACCAGGTGGCACTNT
 A C G T A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCCTCCBGGATGGCAG
-TTTCCTAGAAAGCA-
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCBGGATGGCAG
TACGAGACTCCTCTAAC----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GCCTCCBGGATGGCAG
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCCTCCBGGATGGCAG
--TTCCNGGAAG----
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCCTCCBGGATGGCAG
-TTTCCTGGAAAGNNN
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCCTCCBGGATGGCAG--
-------TAATGGCGGNC
 A C T G G T A C A G T C A C G T A G T C A G T C A C T G T C A G A C T G C G T A A C G T A T C G A C T G A G T C C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C