Information for 6-CTCAGTTAATTAG (Motif 7)

A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G
Reverse Opposite:
T A G C A G C T C G T A C G T A A G C T C G A T C T G A G T C A A G T C A G C T C A T G C G T A A C T G
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.818
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.2 +/- 23.9bp
Average Position of motif in Background48.9 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0001.1_Alx3/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG----
NTNAGCTAATTAGTTNA
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A G T C C G A T A T G C T C G A C T A G G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C G A T A G C T G C T A

PH0174.1_Vax1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG---
CTNNGNTAATTAACNT
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

LHX2/MA0700.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTCAGTTAATTAG-
----NNTAATTAGN
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG---
NTNNGCTAATTANCNT
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG---
CTGAGGTAATTACCNC
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTCAGTTAATTAG---
CTGAGCTAATTACCGT
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTCAGTTAATTAG-
---AATTAATTAGT
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T
A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG---
NTNAGNTAATTACCTN
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

PH0074.1_Hoxd1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTAATTAG----
NNNAGCTAATTAGCTTA
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

MEOX1/MA0661.1/Jaspar

Match Rank:10
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CTCAGTTAATTAG-
----GNTAATTAGN
 A G T C C G A T G A T C C T G A A C T G A C G T A G C T C G T A C T G A A C G T A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C