Information for 9-SGGACCTCRSGCR (Motif 7)

A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
Reverse Opposite:
A G T C A T C G A G T C A T C G A G C T A C T G C G T A A T C G A C T G C G A T A G T C A G T C A T G C
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.9 +/- 28.5bp
Average Position of motif in Background62.2 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:SGGACCTCRSGCR-
NTGCCCANNGGTNA
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SGGACCTCRSGCR
-TGACCTYA----
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SGGACCTCRSGCR
ATGCCCTGAGGC-
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:SGGACCTCRSGCR---
--GACCCCCCGCGAAG
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SGGACCTCRSGCR
--CGCCTCAGGCA
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SGGACCTCRSGCR
WTGSCCTSAGGS-
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SGGACCTCRSGCR
-TGACCT------
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SGGACCTCRSGCR
--AGCCTCAGGCA
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SGGACCTCRSGCR
-TGACCYCT----
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SGGACCTCRSGCR-
NTGCCCTTGGGCGN
 A T C G A C T G A C T G C G T A A G T C A T G C A C G T A G T C C T G A A T G C A C T G A T G C C T A G A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G