Information for 6-GAAATTGCTTCGCTCA (Motif 4)

C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
Reverse Opposite:
G C A T A C T G C G T A A T C G A T G C T A C G C G T A C T G A A C T G A G T C C G T A C T G A A C G T C G A T A G C T A G T C
p-value:1e-16
log p-value:-3.752e+01
Information Content per bp:1.718
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 12.5bp
Average Position of motif in Background33.6 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGCTTCGCTCA
GAAAAAATTGCAAGG----
 A C G T A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAATTGCTTCGCTCA
AGAAATGACTTCCCT--
 A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAATTGCTTCGCTCA
AAAATTGTTATGAA--
 C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGCTTCGCTCA
GGAAAAATTGTTAGGAA--
 A C G T A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAAATTGCTTCGCTCA
-TAATTGATTA-----
 C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAAATTGCTTCGCTCA
DCYAAAAATAGM--------
 A C G T A C G T A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAATTGCTTCGCTCA
CTAATATTGCTAAA----
 A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAATTGCTTCGCTCA
CTAATATTGCTAAA----
 A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAAATTGCTTCGCTCA-
---NTTGATTNNATCAN
 C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A A C G T
A C G T A C G T A C G T C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

PH0007.1_Barx1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATTGCTTCGCTCA
ATNNACTAATTACTTT-----
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A C G T A A G C T C G A T C T A G G T A C A G C T C G A T A G T C T A C G A T G C C G A T T G A C C G T A
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T A C G T A C G T A C G T