Information for 10-CTTAAAACTG (Motif 29)

G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G C T A C G T A G C T C A G T T C G A C T G A A C T G
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.842
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif185.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets41.4 +/- 24.4bp
Average Position of motif in Background49.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTTAAAACTG---
---NHAACBGYYV
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTAAAACTG---
---CCAACTGCCA
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTTAAAACTG---
-----AACCGANA
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTAAAACTG-----
GAAAAAATTGCAAGG
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

POL002.1_INR/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTAAAACTG-
---NNNANTGA
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAAAACTG
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A C G T A C G T G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTTAAAACTG---
---CCAACTGCCA
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTAAAACTG
TTTGAAACCG
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTAAAACTG
GGTCGTAAAATT-
 A C G T A C G T A C G T G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTAAAACTG------
CGACCAACTGCCATGC
 G T A C G A C T A G C T G T C A C T G A C G T A C T G A A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C