Information for 21-CTGACTTCTGAGG (Motif 23)

A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
Reverse Opposite:
A G T C T A G C A C G T A G T C C G T A C T A G C G T A C G T A A T C G A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 21.2bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGACTTCTGAGG
TTGACTTTT----
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGACTTCTGAGG
CTGACCTTTG---
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGACTTCTGAGG--
-TGACCTTTGACCTC
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGACTTCTGAGG
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGACTTCTGAGG--
-TGACCTTTGACCTN
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGACTTCTGAGG
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGACTTCTGAGG
CNNTTGACCTTTG---
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACTTCTGAGG--
-TGACCTTTGACCCC
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACTTCTGAGG
-TGACCYCT----
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACTTCTGAGG--
-TGACCTTTGACCCC
 A G T C A C G T A C T G C G T A A T G C A C G T A C G T A G T C A C G T A C T G C G T A A T C G A C T G A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C