Information for 18-CTGACTTGACCTT (Motif 21)

A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G T C A G A C G T A T G C C G T A C G T A A C T G A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 30.9bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CTGACTTGACCTT--
-----NTGACCTTGA
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTGACTTGACCTT-----
--NNNNTGACCTTTNNNN
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CTGACTTGACCTT--
-----ATGACCTTGA
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CTGACTTGACCTT
-----GTGACCTT
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACTTGACCTT-----
-NNNNATGACCTTGANTN
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTGACTTGACCTT-
------TGACCTYA
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGACTTGACCTT-----
--NNNGTGACCTTTGNNN
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGACTTGACCTT-
----BNTGDCCTTG
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CTGACTTGACCTT---
------TGACCTTGAT
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGACTTGACCTT--
--CNNTTGACCTTTG
 A G T C A C G T A C T G C G T A A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G