Information for 11-KMGRRMMAYGRGGCCA (Motif 12)

A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G A G T C A G T C A G C T G T A C C T G A A C G T A C G T A C G T G A C T G A C T A G T C C A G T G T A C
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 28.1bp
Average Position of motif in Background47.0 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA
--------TRAGGTCA
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA
------AAYTAGGTCA
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:KMGRRMMAYGRGGCCA
--------CTAGGCCT
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:KMGRRMMAYGRGGCCA-----
----NTNNNGGGGTCANGNNN
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA
-GGTCANYTGAGGWCA
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.55
Offset:8
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA
--------AGRGGTCA
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA-----
---AAAAATGGCGCCATTTTT
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA-
----AAGATGATGTCAT
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:KMGRRMMAYGRGGCCA-
-----------TGCCAA
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:9
Orientation:forward strand
Alignment:KMGRRMMAYGRGGCCA--
---------CGTGCCAAG
 A C T G G T C A A C T G C T G A C T G A G T C A G T C A C G T A A G C T A C T G C T G A A C T G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G