Information for 19-AATGGATKCTAAA (Motif 30)

C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
Reverse Opposite:
A G C T A C G T C G A T C T G A T A C G G T C A T G C A A C G T A T G C A G T C C G T A A G C T A C G T
p-value:1e-5
log p-value:-1.239e+01
Information Content per bp:1.752
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif58.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets42.5 +/- 30.5bp
Average Position of motif in Background47.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGGATKCTAAA
ACTATGAATGAATGAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGGATKCTAAA----
-ATGCATAATTAATGAG
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU4F1/MA0790.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGGATKCTAAA--
-ATGAATAATTAATG
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A A C G T A C G T
A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATGGATKCTAAA----
-ATGCATAATTAATGAG
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATGGATKCTAAA-
NNATTGGACTTTNGNN
 A C G T A C G T C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATGGATKCTAAA
-GTGGAT------
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AATGGATKCTAAA
NNNTATTGAATTGNNN-
 A C G T A C G T A C G T A C G T C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AATGGATKCTAAA
-ATGCATAATTCA
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AATGGATKCTAAA
CCATTGTATGCAAAT
 A C G T A C G T C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AATGGATKCTAAA
TGTGGATTNNN--
 C G T A C T G A A C G T T C A G T A C G C G T A A C G T C A G T A G T C A G C T G C T A C G T A C T G A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T