Information for 6-YTGGAKGMTWTCA (Motif 4)

A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G A T C G T A A C G T A G T C G T C A C G A T A G T C A G T C C G T A C T A G
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 17.8bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YTGGAKGMTWTCA-
--NGATGACGTCAT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T
A C G T A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YTGGAKGMTWTCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YTGGAKGMTWTCA-
NTTGATTNNATCAN
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YTGGAKGMTWTCA----
TNNNATGATTTCNNCNN
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YTGGAKGMTWTCA--
AAAGATGATGTCATC
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YTGGAKGMTWTCA-
-AAGATGATGTCAT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YTGGAKGMTWTCA-
--NGATGACGTCAT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:YTGGAKGMTWTCA-----
-AATAGGGTATCAATATT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YTGGAKGMTWTCA-
--NRRTGACGTCAT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YTGGAKGMTWTCA--
-----TGGTTTCAGT
 A G T C A C G T A C T G A C T G C G T A A C G T C T A G G T C A C G A T C G T A A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T