Information for 9-GCGTGCWCCC (Motif 13)

C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G A C T G C G T A C T A G G T A C C G T A A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.833
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets54.4 +/- 16.4bp
Average Position of motif in Background41.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGTGCWCCC
CNGTCCTCCC
 C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCGTGCWCCC
GGACGTGC----
 A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCGTGCWCCC
RTACGTGC----
 A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCWCCC
TGCGTG-----
 A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGCWCCC
NNCGCGTGNN---
 A C G T A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCWCCC
TACGTGCV---
 A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGCWCCC
GGGTACGTGC----
 A C G T A C G T A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGCWCCC
TTGCGTGCVA--
 A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGTGCWCCC--
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCWCCC
CACGTG-----
 A C G T C T A G A G T C A C T G A C G T A C T G A G T C G C A T A G T C A G T C A G T C
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T