Information for 11-ACAGGAMAARGYC (Motif 10)

G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C
Reverse Opposite:
A T C G T C A G A G T C A G C T A C G T A C G T A C G T A C G T A G T C A G T C G C A T A C T G A C G T
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.715
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif78.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.5 +/- 24.8bp
Average Position of motif in Background51.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAGGAMAARGYC-
--AGGTCAAGGTCA
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAGGAMAARGYC-
--AGGTCAAGGTCA
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGAMAARGYC--
NNAGGGACAAGGGCNC
 A C G T G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACAGGAMAARGYC
--TGGAAAA----
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGGAMAARGYC--
CANAGNNCAAAGTCCA
 A C G T G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAGGAMAARGYC--
AGAGTCCAAAGTCCA
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACAGGAMAARGYC
--GGAACAAAGR-
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGGAMAARGYC
AATGGAAAAT---
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGGAMAARGYC
AATGGAAAAT---
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAGGAMAARGYC----
-GGGGTCAAAGTCCAAT
 G T C A T G A C C G T A A C T G C T A G T G C A G T C A G T C A G T C A C T G A A C T G A G T C A T G C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T