Information for 6-AGCAGATGGYAGT (Motif 4)

C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
Reverse Opposite:
C T G A T A G C G A C T T C A G A G T C G T A C T G C A A C G T G T A C A C G T C T A G A T G C C G A T
p-value:1e-14
log p-value:-3.390e+01
Information Content per bp:1.653
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif203.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets46.1 +/- 27.8bp
Average Position of motif in Background49.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGGYAGT
AACAGATGGC---
 C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGGYAGT
AACAGATGGT---
 C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGGYAGT
AACAKATGGY---
 C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGCAGATGGYAGT
VNAVCAGCTGGC---
 A C G T A C G T C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGGYAGT
AACAGATGGTCN-
 C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGCAGATGGYAGT
NAACAGCTGG----
 A C G T C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGATGGYAGT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGCAGATGGYAGT
NNVVCAGCTGBN---
 A C G T A C G T C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGCAGATGGYAGT
ANCAGCTG-----
 C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGCAGATGGYAGT-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T C G T A T A C G G A T C C G T A C A T G T G C A A C G T A C T G C T A G A G T C C T G A A T C G G A C T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G