Information for 10-CCACTAGAGG (Motif 15)

A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
Reverse Opposite:
G T A C G T A C A G C T A G T C C G A T C T G A A C T G C G A T A C T G C T A G
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif86.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.5 +/- 31.0bp
Average Position of motif in Background50.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGAGG-------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGAGG------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGAGG---------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCACTAGAGG---
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGAGG
ACCACTTGAA-
 A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCACTAGAGG
CCACTTGAA-
 A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGAGG
NSCACTYVAV-
 A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGAGG
RSCACTYRAG-
 A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGAGG
ATCCAC------
 A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACTAGAGG--
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A C T A G C T G A A C T G A C T G A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T