Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 805)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47320)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-159	-3.664e+02	0.0000	137.0	17.02%	236.6	0.50%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-144	-3.324e+02	0.0000	203.0	25.22%	1073.0	2.25%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-143	-3.306e+02	0.0000	210.0	26.09%	1193.5	2.51%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-143	-3.299e+02	0.0000	158.0	19.63%	505.9	1.06%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-140	-3.244e+02	0.0000	178.0	22.11%	762.0	1.60%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-139	-3.218e+02	0.0000	207.0	25.71%	1199.9	2.52%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-135	-3.112e+02	0.0000	215.0	26.71%	1407.0	2.95%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-133	-3.085e+02	0.0000	217.0	26.96%	1461.1	3.07%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-129	-2.976e+02	0.0000	225.0	27.95%	1698.8	3.57%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-125	-2.883e+02	0.0000	139.0	17.27%	446.8	0.94%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-73	-1.699e+02	0.0000	99.0	12.30%	456.6	0.96%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-43	-1.004e+02	0.0000	104.0	12.92%	1113.5	2.34%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-42	-9.809e+01	0.0000	43.0	5.34%	109.8	0.23%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-42	-9.671e+01	0.0000	156.0	19.38%	2613.3	5.49%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-41	-9.543e+01	0.0000	117.0	14.53%	1507.4	3.17%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-41	-9.504e+01	0.0000	126.0	15.65%	1757.7	3.69%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-38	-8.936e+01	0.0000	93.0	11.55%	998.3	2.10%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-29	-6.878e+01	0.0000	31.0	3.85%	86.0	0.18%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-28	-6.518e+01	0.0000	31.0	3.85%	96.0	0.20%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-22	-5.296e+01	0.0000	51.0	6.34%	500.4	1.05%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-22	-5.148e+01	0.0000	90.0	11.18%	1580.4	3.32%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-18	-4.372e+01	0.0000	69.0	8.57%	1115.4	2.34%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-18	-4.312e+01	0.0000	58.0	7.20%	814.3	1.71%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-18	-4.280e+01	0.0000	43.0	5.34%	446.1	0.94%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-18	-4.234e+01	0.0000	40.0	4.97%	386.8	0.81%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-13	-3.117e+01	0.0000	46.0	5.71%	708.4	1.49%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-13	-3.087e+01	0.0000	27.0	3.35%	241.8	0.51%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-12	-2.879e+01	0.0000	45.0	5.59%	729.9	1.53%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-12	-2.833e+01	0.0000	110.0	13.66%	3126.2	6.57%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-11	-2.695e+01	0.0000	23.0	2.86%	201.2	0.42%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-11	-2.658e+01	0.0000	89.0	11.06%	2356.5	4.95%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-11	-2.584e+01	0.0000	81.0	10.06%	2074.7	4.36%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-10	-2.517e+01	0.0000	57.0	7.08%	1212.9	2.55%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-10	-2.372e+01	0.0000	94.0	11.68%	2697.5	5.67%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-9	-2.297e+01	0.0000	75.0	9.32%	1964.1	4.12%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-9	-2.230e+01	0.0000	60.0	7.45%	1419.7	2.98%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-9	-2.106e+01	0.0000	75.0	9.32%	2052.0	4.31%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-8	-1.937e+01	0.0000	109.0	13.54%	3605.6	7.57%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-7	-1.741e+01	0.0000	85.0	10.56%	2670.7	5.61%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-6	-1.589e+01	0.0000	84.0	10.43%	2724.0	5.72%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-6	-1.476e+01	0.0000	51.0	6.34%	1392.7	2.92%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-6	-1.453e+01	0.0000	70.0	8.70%	2198.0	4.62%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-6	-1.426e+01	0.0000	50.0	6.21%	1376.7	2.89%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-6	-1.415e+01	0.0000	98.0	12.17%	3486.0	7.32%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-6	-1.397e+01	0.0000	47.0	5.84%	1270.7	2.67%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-5	-1.375e+01	0.0000	43.0	5.34%	1123.6	2.36%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-5	-1.331e+01	0.0000	48.0	5.96%	1342.8	2.82%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-5	-1.331e+01	0.0000	18.0	2.24%	273.2	0.57%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-5	-1.330e+01	0.0000	52.0	6.46%	1506.1	3.16%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-5	-1.233e+01	0.0000	22.0	2.73%	417.4	0.88%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-5	-1.228e+01	0.0000	34.0	4.22%	841.6	1.77%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-5	-1.212e+01	0.0000	6.0	0.75%	25.7	0.05%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-5	-1.174e+01	0.0001	39.0	4.84%	1058.5	2.22%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-5	-1.166e+01	0.0001	121.0	15.03%	4823.7	10.13%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-4	-1.149e+01	0.0001	31.0	3.85%	761.0	1.60%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-4	-1.147e+01	0.0001	43.0	5.34%	1233.2	2.59%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-4	-1.108e+01	0.0001	30.0	3.73%	739.9	1.55%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-4	-1.102e+01	0.0001	28.0	3.48%	667.4	1.40%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-4	-1.050e+01	0.0002	53.0	6.58%	1715.3	3.60%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-4	-9.979e+00	0.0003	46.0	5.71%	1444.8	3.03%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-4	-9.238e+00	0.0006	27.0	3.35%	702.4	1.48%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-3	-9.097e+00	0.0007	222.0	27.58%	10471.7	21.99%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-3	-8.821e+00	0.0009	23.0	2.86%	567.8	1.19%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-3	-8.100e+00	0.0017	61.0	7.58%	2264.8	4.76%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-3	-7.790e+00	0.0023	4.0	0.50%	20.7	0.04%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-3	-7.731e+00	0.0024	32.0	3.98%	982.8	2.06%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-3	-7.597e+00	0.0027	72.0	8.94%	2841.3	5.97%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-3	-7.235e+00	0.0039	11.0	1.37%	199.1	0.42%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-2	-6.660e+00	0.0068	17.0	2.11%	428.8	0.90%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-2	-6.640e+00	0.0068	28.0	3.48%	878.0	1.84%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-2	-6.631e+00	0.0068	34.0	4.22%	1140.6	2.40%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-2	-6.246e+00	0.0098	92.0	11.43%	4009.9	8.42%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-2	-6.064e+00	0.0116	9.0	1.12%	165.9	0.35%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-5.945e+00	0.0129	39.0	4.84%	1421.9	2.99%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-2	-5.751e+00	0.0154	7.0	0.87%	111.8	0.23%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-2	-5.584e+00	0.0180	36.0	4.47%	1312.7	2.76%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-5.318e+00	0.0232	188.0	23.35%	9337.1	19.61%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-2	-5.303e+00	0.0232	30.0	3.73%	1058.7	2.22%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2	-5.005e+00	0.0309	267.0	33.17%	13858.3	29.11%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-2	-4.844e+00	0.0358	13.0	1.61%	351.6	0.74%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-2	-4.751e+00	0.0388	17.0	2.11%	520.1	1.09%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-4.514e+00	0.0487	43.0	5.34%	1753.5	3.68%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-1	-4.513e+00	0.0487	15.0	1.86%	449.3	0.94%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-4.406e+00	0.0529	14.0	1.74%	413.5	0.87%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-1	-4.371e+00	0.0541	78.0	9.69%	3564.1	7.49%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-4.365e+00	0.0541	34.0	4.22%	1329.5	2.79%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-4.314e+00	0.0560	39.0	4.84%	1578.9	3.32%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-1	-4.311e+00	0.0560	18.0	2.24%	590.0	1.24%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-1	-4.225e+00	0.0598	13.0	1.61%	381.2	0.80%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-4.143e+00	0.0642	107.0	13.29%	5153.5	10.82%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-1	-4.100e+00	0.0663	7.0	0.87%	153.6	0.32%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-3.995e+00	0.0728	9.0	1.12%	231.1	0.49%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-1	-3.969e+00	0.0740	33.0	4.10%	1321.8	2.78%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-1	-3.803e+00	0.0863	9.0	1.12%	239.1	0.50%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-3.724e+00	0.0925	34.0	4.22%	1397.0	2.93%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-3.688e+00	0.0949	41.0	5.09%	1752.0	3.68%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-3.678e+00	0.0949	35.0	4.35%	1452.7	3.05%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-3.646e+00	0.0969	93.0	11.55%	4497.9	9.45%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-1	-3.509e+00	0.1100	35.0	4.35%	1472.8	3.09%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-3.443e+00	0.1164	8.0	0.99%	215.4	0.45%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-1	-3.377e+00	0.1231	13.0	1.61%	430.7	0.90%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-3.219e+00	0.1427	22.0	2.73%	863.0	1.81%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-3.176e+00	0.1475	19.0	2.36%	722.5	1.52%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-3.164e+00	0.1479	54.0	6.71%	2502.8	5.26%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-1	-3.161e+00	0.1479	43.0	5.34%	1927.2	4.05%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-3.049e+00	0.1628	90.0	11.18%	4463.8	9.37%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-3.016e+00	0.1667	5.0	0.62%	116.4	0.24%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.990e+00	0.1694	23.0	2.86%	934.3	1.96%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e-1	-2.988e+00	0.1694	7.0	0.87%	195.6	0.41%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e-1	-2.946e+00	0.1738	12.0	1.49%	414.9	0.87%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-1	-2.935e+00	0.1743	87.0	10.81%	4325.2	9.08%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-2.927e+00	0.1743	53.0	6.58%	2490.6	5.23%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-1	-2.920e+00	0.1743	4.0	0.50%	83.2	0.17%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-2.903e+00	0.1751	33.0	4.10%	1448.5	3.04%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-2.879e+00	0.1779	31.0	3.85%	1349.9	2.84%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-1	-2.860e+00	0.1797	26.0	3.23%	1098.3	2.31%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-2.843e+00	0.1812	36.0	4.47%	1611.1	3.38%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-1	-2.797e+00	0.1881	27.0	3.35%	1156.6	2.43%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-2.756e+00	0.1928	7.0	0.87%	206.8	0.43%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-2.756e+00	0.1928	7.0	0.87%	206.2	0.43%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-2.747e+00	0.1929	8.0	0.99%	249.2	0.52%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-2.743e+00	0.1929	19.0	2.36%	763.1	1.60%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-2.738e+00	0.1929	11.0	1.37%	384.0	0.81%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-2.715e+00	0.1944	34.0	4.22%	1526.3	3.21%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-1	-2.682e+00	0.1992	5.0	0.62%	128.1	0.27%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-2.658e+00	0.2025	23.0	2.86%	971.1	2.04%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-2.632e+00	0.2062	27.0	3.35%	1177.2	2.47%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-2.630e+00	0.2062	77.0	9.57%	3848.4	8.08%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-1	-2.627e+00	0.2062	9.0	1.12%	300.9	0.63%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-2.595e+00	0.2089	16.0	1.99%	631.8	1.33%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-2.539e+00	0.2193	61.0	7.58%	2995.3	6.29%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-2.511e+00	0.2238	13.0	1.61%	494.1	1.04%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-2.461e+00	0.2336	55.0	6.83%	2686.9	5.64%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-1	-2.430e+00	0.2392	25.0	3.11%	1101.3	2.31%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.415e+00	0.2409	66.0	8.20%	3295.7	6.92%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-2.376e+00	0.2486	8.0	0.99%	271.9	0.57%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-1	-2.350e+00	0.2535	35.0	4.35%	1635.7	3.44%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.337e+00	0.2548	12.0	1.49%	461.2	0.97%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-2.314e+00	0.2588	9.0	1.12%	321.5	0.68%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-2.179e+00	0.2942	37.0	4.60%	1771.1	3.72%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.167e+00	0.2955	8.0	0.99%	285.7	0.60%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.159e+00	0.2959	84.0	10.43%	4357.0	9.15%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-2.094e+00	0.3136	11.0	1.37%	434.8	0.91%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-2.083e+00	0.3149	6.0	0.75%	200.0	0.42%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-2.067e+00	0.3176	1.0	0.12%	8.1	0.02%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.017e+00	0.3318	67.0	8.32%	3448.4	7.24%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.994e+00	0.3372	75.0	9.32%	3900.5	8.19%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.973e+00	0.3419	66.0	8.20%	3404.7	7.15%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.966e+00	0.3421	15.0	1.86%	647.2	1.36%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.954e+00	0.3440	2.0	0.25%	39.6	0.08%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.939e+00	0.3467	35.0	4.35%	1708.5	3.59%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.920e+00	0.3510	61.0	7.58%	3140.6	6.60%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-1.907e+00	0.3532	34.0	4.22%	1660.3	3.49%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.881e+00	0.3601	34.0	4.22%	1665.8	3.50%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.850e+00	0.3694	4.0	0.50%	123.5	0.26%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.846e+00	0.3694	6.0	0.75%	214.3	0.45%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.838e+00	0.3694	16.0	1.99%	714.9	1.50%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.832e+00	0.3694	40.0	4.97%	2002.7	4.21%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.826e+00	0.3694	13.0	1.61%	561.8	1.18%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-1.813e+00	0.3710	3.0	0.37%	82.5	0.17%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.799e+00	0.3741	43.0	5.34%	2174.1	4.57%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.789e+00	0.3755	161.0	20.00%	8863.0	18.61%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.779e+00	0.3768	37.0	4.60%	1849.9	3.89%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.752e+00	0.3851	74.0	9.19%	3915.2	8.22%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.751e+00	0.3851	19.0	2.36%	883.6	1.86%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.750e+00	0.3851	10.0	1.24%	417.7	0.88%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.745e+00	0.3851	50.0	6.21%	2574.2	5.41%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.742e+00	0.3851	30.0	3.73%	1475.6	3.10%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.740e+00	0.3851	25.0	3.11%	1205.9	2.53%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.737e+00	0.3851	89.0	11.06%	4767.9	10.01%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.724e+00	0.3851	54.0	6.71%	2802.5	5.89%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.713e+00	0.3851	156.0	19.38%	8609.0	18.08%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.671e+00	0.3956	7.0	0.87%	275.5	0.58%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.662e+00	0.3969	10.0	1.24%	426.4	0.90%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.627e+00	0.4088	61.0	7.58%	3221.2	6.77%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.625e+00	0.4088	30.0	3.73%	1498.6	3.15%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.614e+00	0.4096	19.0	2.36%	904.9	1.90%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.604e+00	0.4114	38.0	4.72%	1944.0	4.08%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.584e+00	0.4173	11.0	1.37%	486.5	1.02%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.578e+00	0.4173	5.0	0.62%	185.2	0.39%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.561e+00	0.4223	92.0	11.43%	5000.3	10.50%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.555e+00	0.4223	24.0	2.98%	1185.0	2.49%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.491e+00	0.4476	24.0	2.98%	1196.7	2.51%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.480e+00	0.4503	16.0	1.99%	764.2	1.60%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.472e+00	0.4515	23.0	2.86%	1145.5	2.41%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.468e+00	0.4515	52.0	6.46%	2761.6	5.80%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.465e+00	0.4515	26.0	3.23%	1311.2	2.75%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.462e+00	0.4515	38.0	4.72%	1977.7	4.15%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.432e+00	0.4600	30.0	3.73%	1539.6	3.23%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.408e+00	0.4688	3.0	0.37%	101.7	0.21%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.408e+00	0.4688	48.0	5.96%	2553.1	5.36%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.391e+00	0.4720	31.0	3.85%	1604.2	3.37%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.387e+00	0.4720	1.0	0.12%	17.4	0.04%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.366e+00	0.4789	24.0	2.98%	1221.6	2.57%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.361e+00	0.4789	16.0	1.99%	783.0	1.64%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.331e+00	0.4909	38.0	4.72%	2011.4	4.22%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.317e+00	0.4950	5.0	0.62%	205.1	0.43%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.299e+00	0.5014	11.0	1.37%	522.8	1.10%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.270e+00	0.5134	5.0	0.62%	209.7	0.44%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.270e+00	0.5134	3.0	0.37%	109.8	0.23%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.237e+00	0.5255	60.0	7.45%	3290.2	6.91%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.216e+00	0.5340	6.0	0.75%	266.8	0.56%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.215e+00	0.5340	20.0	2.48%	1030.3	2.16%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.208e+00	0.5340	8.0	0.99%	373.5	0.78%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.182e+00	0.5444	5.0	0.62%	217.5	0.46%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.172e+00	0.5471	23.0	2.86%	1207.0	2.54%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.168e+00	0.5471	6.0	0.75%	272.0	0.57%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.156e+00	0.5510	30.0	3.73%	1606.9	3.37%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.133e+00	0.5607	129.0	16.02%	7326.4	15.39%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.125e+00	0.5626	16.0	1.99%	825.0	1.73%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.118e+00	0.5640	12.0	1.49%	604.0	1.27%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.107e+00	0.5674	95.0	11.80%	5363.1	11.26%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.098e+00	0.5701	1.0	0.12%	24.7	0.05%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.091e+00	0.5712	23.0	2.86%	1226.8	2.58%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.090e+00	0.5712	5.0	0.62%	226.6	0.48%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.065e+00	0.5810	1.0	0.12%	25.1	0.05%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.058e+00	0.5826	4.0	0.50%	176.0	0.37%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.031e+00	0.5954	11.0	1.37%	563.8	1.18%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.026e+00	0.5960	3.0	0.37%	126.5	0.27%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.024e+00	0.5960	37.0	4.60%	2044.5	4.29%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.021e+00	0.5960	32.0	3.98%	1758.7	3.69%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.013e+00	0.5960	31.0	3.85%	1704.0	3.58%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-9.821e-01	0.6113	18.0	2.24%	968.6	2.03%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-9.652e-01	0.6190	12.0	1.49%	631.1	1.33%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-9.622e-01	0.6190	49.0	6.09%	2759.1	5.79%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-9.477e-01	0.6216	1.0	0.12%	29.5	0.06%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-9.477e-01	0.6216	1.0	0.12%	30.0	0.06%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-9.406e-01	0.6232	3.0	0.37%	133.6	0.28%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-9.296e-01	0.6274	30.0	3.73%	1671.8	3.51%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-9.286e-01	0.6274	45.0	5.59%	2540.7	5.34%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-9.249e-01	0.6274	28.0	3.48%	1557.3	3.27%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-8.961e-01	0.6404	27.0	3.35%	1508.1	3.17%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-8.758e-01	0.6507	158.0	19.63%	9182.4	19.28%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-8.472e-01	0.6667	5.0	0.62%	254.5	0.53%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-8.442e-01	0.6667	25.0	3.11%	1409.0	2.96%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-8.391e-01	0.6667	7.0	0.87%	369.0	0.78%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-8.323e-01	0.6682	3.0	0.37%	143.5	0.30%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-8.235e-01	0.6712	135.0	16.77%	7866.7	16.52%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-8.081e-01	0.6788	11.0	1.37%	605.2	1.27%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-7.762e-01	0.6979	15.0	1.86%	845.9	1.78%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-7.614e-01	0.7053	70.0	8.70%	4080.1	8.57%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-7.502e-01	0.7104	23.0	2.86%	1321.5	2.78%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-7.439e-01	0.7119	7.0	0.87%	385.1	0.81%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-7.431e-01	0.7119	184.0	22.86%	10816.3	22.72%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-7.291e-01	0.7167	31.0	3.85%	1799.3	3.78%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-6.965e-01	0.7374	52.0	6.46%	3054.0	6.41%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-6.564e-01	0.7644	36.0	4.47%	2125.9	4.46%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-6.555e-01	0.7644	6.0	0.75%	342.4	0.72%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-6.544e-01	0.7644	2.0	0.25%	103.3	0.22%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-6.469e-01	0.7644	14.0	1.74%	821.7	1.73%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-6.392e-01	0.7653	4.0	0.50%	225.3	0.47%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-6.138e-01	0.7818	55.0	6.83%	3276.8	6.88%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-6.109e-01	0.7818	68.0	8.45%	4051.4	8.51%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-6.020e-01	0.7849	40.0	4.97%	2389.4	5.02%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-6.008e-01	0.7849	3.0	0.37%	170.0	0.36%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.959e-01	0.7849	63.0	7.83%	3763.4	7.90%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-5.849e-01	0.7892	16.0	1.99%	960.5	2.02%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-5.799e-01	0.7900	9.0	1.12%	539.1	1.13%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-5.783e-01	0.7900	5.0	0.62%	296.0	0.62%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-5.708e-01	0.7911	4.0	0.50%	236.4	0.50%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-5.494e-01	0.8051	14.0	1.74%	851.5	1.79%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-5.369e-01	0.8122	8.0	0.99%	489.5	1.03%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-5.345e-01	0.8122	47.0	5.84%	2845.2	5.98%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-5.341e-01	0.8122	61.0	7.58%	3684.3	7.74%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-5.319e-01	0.8122	11.0	1.37%	674.8	1.42%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-5.317e-01	0.8122	20.0	2.48%	1221.2	2.56%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-5.227e-01	0.8122	13.0	1.61%	799.4	1.68%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-5.211e-01	0.8122	10.0	1.24%	616.2	1.29%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-5.024e-01	0.8188	29.0	3.60%	1779.0	3.74%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-4.891e-01	0.8267	46.0	5.71%	2813.6	5.91%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-4.772e-01	0.8335	23.0	2.86%	1427.6	3.00%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-4.684e-01	0.8378	7.0	0.87%	446.0	0.94%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-4.648e-01	0.8378	6.0	0.75%	383.1	0.80%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-4.592e-01	0.8393	74.0	9.19%	4520.3	9.49%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.467e-01	0.8468	7.0	0.87%	451.2	0.95%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-4.456e-01	0.8468	3.0	0.37%	195.2	0.41%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.405e-01	0.8468	1.0	0.12%	61.6	0.13%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-4.350e-01	0.8475	3.0	0.37%	197.1	0.41%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.209e-01	0.8565	8.0	0.99%	522.7	1.10%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-4.113e-01	0.8616	18.0	2.24%	1151.9	2.42%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-4.074e-01	0.8619	11.0	1.37%	716.3	1.50%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-4.011e-01	0.8643	9.0	1.12%	592.4	1.24%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-4.002e-01	0.8643	3.0	0.37%	204.8	0.43%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-3.992e-01	0.8643	15.0	1.86%	970.2	2.04%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.912e-01	0.8643	14.0	1.74%	911.9	1.92%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-3.871e-01	0.8643	9.0	1.12%	597.5	1.25%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.626e-01	0.8795	2.0	0.25%	143.1	0.30%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.626e-01	0.8795	2.0	0.25%	143.1	0.30%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-3.578e-01	0.8806	1.0	0.12%	71.9	0.15%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-3.425e-01	0.8912	9.0	1.12%	614.2	1.29%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-3.367e-01	0.8932	1.0	0.12%	74.9	0.16%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-3.207e-01	0.9045	75.0	9.32%	4712.3	9.90%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-3.185e-01	0.9045	2.0	0.25%	152.5	0.32%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-3.051e-01	0.9126	2.0	0.25%	155.3	0.33%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-2.965e-01	0.9173	2.0	0.25%	157.5	0.33%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.942e-01	0.9173	8.0	0.99%	569.5	1.20%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.898e-01	0.9173	3.0	0.37%	231.4	0.49%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.872e-01	0.9173	14.0	1.74%	963.3	2.02%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.807e-01	0.9194	8.0	0.99%	575.4	1.21%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-2.795e-01	0.9194	3.0	0.37%	234.1	0.49%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-2.785e-01	0.9194	8.0	0.99%	576.7	1.21%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.785e-01	0.9194	22.0	2.73%	1479.7	3.11%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.528e-01	0.9330	4.0	0.50%	314.3	0.66%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-2.460e-01	0.9363	1.0	0.12%	90.4	0.19%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-2.446e-01	0.9363	65.0	8.07%	4190.5	8.80%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.417e-01	0.9363	12.0	1.49%	860.3	1.81%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.401e-01	0.9363	80.0	9.94%	5118.3	10.75%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.356e-01	0.9363	21.0	2.61%	1448.3	3.04%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-2.187e-01	0.9466	6.0	0.75%	469.8	0.99%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-2.178e-01	0.9466	70.0	8.70%	4535.4	9.53%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-2.165e-01	0.9466	2.0	0.25%	179.7	0.38%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.073e-01	0.9483	1.0	0.12%	99.7	0.21%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.038e-01	0.9486	22.0	2.73%	1540.6	3.24%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.962e-01	0.9528	5.0	0.62%	410.4	0.86%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.892e-01	0.9564	15.0	1.86%	1096.9	2.30%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.879e-01	0.9564	9.0	1.12%	694.1	1.46%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.793e-01	0.9598	4.0	0.50%	346.8	0.73%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.756e-01	0.9603	12.0	1.49%	907.4	1.91%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.729e-01	0.9603	23.0	2.86%	1637.0	3.44%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.708e-01	0.9603	18.0	2.24%	1311.7	2.75%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.691e-01	0.9603	5.0	0.62%	425.2	0.89%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.641e-01	0.9603	5.0	0.62%	428.6	0.90%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.537e-01	0.9664	12.0	1.49%	926.9	1.95%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.442e-01	0.9726	12.0	1.49%	935.8	1.97%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.426e-01	0.9726	5.0	0.62%	442.5	0.93%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.410e-01	0.9726	8.0	0.99%	660.4	1.39%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.358e-01	0.9726	14.0	1.74%	1080.5	2.27%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.298e-01	0.9747	2.0	0.25%	215.4	0.45%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.216e-01	0.9797	1.0	0.12%	128.4	0.27%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.181e-01	0.9802	82.0	10.19%	5469.6	11.49%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.168e-01	0.9802	84.0	10.43%	5597.0	11.75%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.096e-01	0.9826	3.0	0.37%	311.2	0.65%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.076e-01	0.9826	34.0	4.22%	2446.7	5.14%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.030e-01	0.9832	9.0	1.12%	769.6	1.62%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-9.027e-02	0.9928	4.0	0.50%	408.8	0.86%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-8.818e-02	0.9928	1.0	0.12%	146.3	0.31%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-5.698e-02	1.0000	13.0	1.61%	1131.8	2.38%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-5.328e-02	1.0000	15.0	1.86%	1283.6	2.70%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.301e-02	1.0000	147.0	18.26%	9826.4	20.64%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.293e-02	1.0000	57.0	7.08%	4143.0	8.70%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.918e-02	1.0000	63.0	7.83%	4552.6	9.56%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-3.348e-02	1.0000	58.0	7.20%	4262.8	8.95%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.636e-02	1.0000	8.0	0.99%	845.0	1.77%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.257e-02	1.0000	6.0	0.75%	698.9	1.47%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-2.092e-02	1.0000	28.0	3.48%	2336.7	4.91%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-6.594e-03	1.0000	36.0	4.47%	3076.0	6.46%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-4.549e-03	1.0000	90.0	11.18%	6781.1	14.24%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-3.502e-03	1.0000	66.0	8.20%	5240.5	11.01%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-3.262e-03	1.0000	58.0	7.20%	4711.5	9.89%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-6.640e-04	1.0000	54.0	6.71%	4692.3	9.85%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.620e-04	1.0000	51.0	6.34%	4683.2	9.84%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	39.8	0.08%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	59.3	0.12%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.1	0.02%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	87.5	0.18%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	44.4	0.09%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	144.8	0.30%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	19.0	0.04%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	63.0	0.13%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	5.1	0.01%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	95.7	0.20%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	19.9	0.04%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	6.7	0.01%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	146.9	0.31%