Information for 4-AGCGCCCTCTGCA (Motif 5)

T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A
Reverse Opposite:
C G A T A T C G A G T C C G T A A C T G C T G A A C T G C A T G A T C G T G A C A C T G A G T C A G C T
p-value:1e-24
log p-value:-5.733e+01
Information Content per bp:1.775
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif56.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.6 +/- 14.6bp
Average Position of motif in Background50.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCCTCTGCA---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCCTCTGCA-----
TAGCGCCCCCTGGTGGCCA
 A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCTCTGCA-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCCTCTGCA-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGCCCTCTGCA
NNNGGGGCGCCCCCNN--
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCGCCCTCTGCA-----
-AATCGCACTGCATTCCG
 T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCGCCCTCTGCA-
--CGCCCCCTGACA
 T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCGCCCTCTGCA
---GCCATCTGTT
 T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCGCCCTCTGCA--
-GTGCCGTGTGCAAA
 T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCCCTCTGCA
ANCGCGCGCCCTTNN
 A C G T A C G T T C G A A C T G A G T C A C T G A T G C G A T C G T A C G A C T A G T C A C G T T C A G A T G C G C T A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T