Information for 17-TTAGCCAGGA (Motif 16)

A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
Reverse Opposite:
G A C T T A G C G T A C C G A T C T A G C T A G T A G C G C A T C T G A T G C A
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.665
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif482.3
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets45.9 +/- 23.9bp
Average Position of motif in Background50.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCCAGGA-
NNAATTAGTCACGGT
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAGCCAGGA
TGAGTCAGCA
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGCCAGGA
--TGCCAA--
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAGCCAGGA
BCAGACWA--
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGCCAGGA
CGTGCCAAG-
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTAGCCAGGA---
---ANCAGGATGT
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTAGCCAGGA
-TTGCCAAG-
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTAGCCAGGA----
----ACAGGAAGTG
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAGCCAGGA
ATAATCCC---
 A C G T A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTAGCCAGGA
TGACTCAGCA
 A C G T G A C T C G T A A T C G G A T C G A T C G C T A C A T G A T C G C T G A
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A