Information for 20-AAGAAAAAAA (Motif 27)

C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A
Reverse Opposite:
A G C T A C G T C A G T A C G T G A C T G A C T A C G T A G T C A C G T G A C T
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.827
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif412.7
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets54.0 +/- 28.4bp
Average Position of motif in Background49.8 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAGAAAAAAA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAGAAAAAAA
AAATAAGAAAAAAC
 A C G T A C G T A C G T A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAAAA-
TACTGGAAAAAAAA
 A C G T A C G T A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAAAA--
CAAAAGTAAACAAAG
 A C G T A C G T A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAAAAA
AAAGTAAACA-
 A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAAAAA-
TAAGTAAACAAA
 A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAAAAA
AAAGTAAACA-
 A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAAAA----
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAGAAAAAAA--
AAACAAACATTC
 C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAAAAAA
WAAGTAAAYA-
 A C G T C T G A G T C A C T A G T G C A C T G A C T G A C G T A G T C A T G C A T C G A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T