Information for 8-MCTCYGWGAYCMCGCY (Motif 22)

G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A C T G A C G T A C T G C T A G A C G T A G T C C G T A A G T C C T A G A C T G G T C A C T A G A C G T
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 19.2bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:MCTCYGWGAYCMCGCY------
-------GACCACGCCCTTATT
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MCTCYGWGAYCMCGCY-
-----GCGACCACACTG
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MCTCYGWGAYCMCGCY--
--NNCNTGACCCCGCTCT
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------MCTCYGWGAYCMCGCY
NNNTGAACTCNNTGACCTCN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:MCTCYGWGAYCMCGCY-----
-----TCGACCCCGCCCCTAT
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:MCTCYGWGAYCMCGCY--
--NNNNTGACCCGGCGCG
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:8
Orientation:forward strand
Alignment:MCTCYGWGAYCMCGCY
--------AGCGCGCC
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MCTCYGWGAYCMCGCY--
-TGTCGTGACCCCTTAAT
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---MCTCYGWGAYCMCGCY
TGAACCCGATGACCC----
 A C G T A C G T A C G T G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:MCTCYGWGAYCMCGCY
----------CACGCA
 G T C A A G T C C A G T A G T C A G T C C T A G C G A T A C T G C G T A A G T C A G T C G T C A A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A