Information for 13-ACATGAACAA (Motif 19)

G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A G C T C G A T A G T C G T C A A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.867
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.7 +/- 31.0bp
Average Position of motif in Background50.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACATGAACAA--
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACATGAACAA--
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACATGAACAA--
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACATGAACAA-------
AGAAGAACAAAGGACTA
 G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACATGAACAA-------
ATAAGAACAAAGGACTA
 G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACATGAACAA--
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACATGAACAA------
NNNNNGAACAATTGANN
 A C G T G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACATGAACAA-
-----AACAAT
 G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACATGAACAA
--GTAAACAA
 G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACATGAACAA------
TTAAGAACAATAAATT
 G T C A A G T C C G T A A C G T C T A G C G T A C T G A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T