Information for 9-CATTGTGTAG (Motif 11)

A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T G T C A A G T C C T G A A G T C C G T A C G T A C A G T C T A G
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.764
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif112.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.6 +/- 24.9bp
Average Position of motif in Background47.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CATTGTGTAG-
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CATTGTGTAG
CTTTGT----
 A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CATTGTGTAG-
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CATTGTGTAG
CTCATTGTC---
 A C G T A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTGTGTAG
CCWTTGTYYB-
 A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CATTGTGTAG
-ATTGTTTAN
 A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATTGTGTAG
NCCATTGTTY--
 A C G T A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTGTGTAG
CCWTTGTY---
 A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATTGTGTAG
AGGVNCCTTTGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CATTGTGTAG
CCTTTGTT---
 A C G T A G T C G T C A C G A T A C G T A C T G A G C T T C A G A C G T C G T A C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T