Information for 9-CACAGTGACGCCT (Motif 10)

A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G A G T C A T C G A C G T A T G C C G T A A T G C A G C T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 26.8bp
Average Position of motif in Background61.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACAGTGACGCCT
-ACAAAGGNBCCT
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACAGTGACGCCT
-----TGACGTCA
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACAGTGACGCCT---
-NNGGCCACGCCTTTN
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAGTGACGCCT----
NNNNTTGACCCCTNNNN
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACAGTGACGCCT
-----TGACACCT
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CACAGTGACGCCT--
-------AGGCCTNG
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CACAGTGACGCCT
-----TCACACCT
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CACAGTGACGCCT
-----TGACGT--
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACAGTGACGCCT
--NCGTGACN---
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACAGTGACGCCT
-----TCACACCT
 A G T C G T C A A G T C C T G A A T C G A C G T A T C G C G T A A T G C A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T