Information for 18-MTTATGTATC (Motif 21)

G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
Reverse Opposite:
A C T G C T G A A G C T C T G A G T A C C T G A G C A T C G T A C G T A A C G T
p-value:1e-4
log p-value:-9.825e+00
Information Content per bp:1.753
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif226.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets40.9 +/- 27.7bp
Average Position of motif in Background50.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:MTTATGTATC---
--AATGTATCAAT
 G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:MTTATGTATC--
-TTATGTAACAT
 G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C A C G T A C G T
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MTTATGTATC
RTTATGYAAB
 G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

TEF/MA0843.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MTTATGTATC-
NGTTACGTAATN
 A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MTTATGTATC
GHATATKCAT-
 A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-MTTATGTATC
GAATATTCAT-
 A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MTTATGTATC
CCATATGT---
 A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--MTTATGTATC
ACCATATGTT--
 A C G T A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MTTATGTATC-
NGTTACGTAATN
 A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C A C G T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---MTTATGTATC
TGAATTATGCAT-
 A C G T A C G T A C G T G T C A C G A T C G A T C G T A A G C T A C T G A G C T T C G A G A C T A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T