Information for 12-CCAATCAGAG (Motif 16)

A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
Reverse Opposite:
T G A C C G A T A G T C A G C T A T C G G T C A A G C T A C G T A C T G A C T G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.840
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif259.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets51.7 +/- 28.2bp
Average Position of motif in Background50.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.86
Offset:-7
Orientation:forward strand
Alignment:-------CCAATCAGAG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCAGAG----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CCAATCAGAG
AGCCAATCGG--
 A C G T A C G T A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCAATCAGAG
CCAATCAA--
 A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCAGAG
ACTAGCCAATCA---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCAATCAGAG
CAAATCACTG
 A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAATCAGAG-
-AAATCACTGC
 A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAATCAGAG--
-AAATCACAGCA
 A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGAG---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAATCAGAG
CCAATTAA--
 A G T C G T A C G T C A C T G A A C G T A T G C C T G A T C A G G C T A A C T G
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T