Information for 6-TCATCTTCAGTGB (Motif 8)

A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
Reverse Opposite:
T G C A T A G C G T C A A G T C A C G T A C T G C G T A G T C A C T A G C T G A A C G T C T A G C T G A
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.787
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.1 +/- 23.4bp
Average Position of motif in Background49.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCATCTTCAGTGB
---GCTTCC----
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCATCTTCAGTGB-
------TCAGTCTT
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCATCTTCAGTGB--
----CTTGAGTGGCT
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0108.1_Atf1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCATCTTCAGTGB
NTTATTCGTCATNC-
 A C G T A C G T A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCATCTTCAGTGB-
----CTYRAGTGSY
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TCATCTTCAGTGB
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCATCTTCAGTGB
ATGACCTTGA----
 A C G T A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCATCTTCAGTGB
---ACGTCA----
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TCATCTTCAGTGB
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCATCTTCAGTGB-
-----TTAAGTGGT
 A G C T A G T C C G T A A G C T A G T C A C G T A C G T G T A C C G T A C T A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T