Information for 16-CAGAACTTCTAGA (Motif 22)

A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A
Reverse Opposite:
C G A T A G T C C G A T C G T A A C T G C G T A C T G A A T C G A C G T G A C T A T G C C G A T A C T G
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.8 +/- 22.1bp
Average Position of motif in Background43.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGAACTTCTAGA--
VAGRACAKNCTGTBC
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

POL005.1_DPE/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGAACTTCTAGA
NACATCTTN----
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A
C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGAACTTCTAGA--
VAGRACAKWCTGTYC
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGAACTTCTAGA---
-TGAACCCGATGACCC
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T A C G T
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CAGAACTTCTAGA
TATCATTAGAACGCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAGAACTTCTAGA
CNTTAAGTACTTAANG-
 A C G T A C G T A C G T A C G T A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGAACTTCTAGA--
AAGAACATWHTGTTC
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGAACTTCTAGA
ATGTCACAACAACAC--
 A C G T A C G T A C G T A C G T A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGAACTTCTAGA----
CTAAGGTTCTAGATCAC
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGAACTTCTAGA--
--NAACATCTGGATN
 A G T C C G T A T A C G C T G A C G T A A T G C A G C T C G A T T A G C G C A T C G T A C T A G G C T A A C G T A C G T
A C G T A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G