Information for 13-GAAACTCGAGTTT (Motif 18)

T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A C G T G A T C A C T G C G T A A C T G C G A T C G A T A C G T A T G C
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.2 +/- 22.2bp
Average Position of motif in Background52.0 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAACTCGAGTTT
GWAAYHTGAKMC-
 T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAACTCGAGTTT--
NNTAAAAACGATGTTNT
 A C G T A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAACTCGAGTTT
AAAAAATCGATAAT
 A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAACTCGAGTTT----
-TTTTACGACTTTCCAT
 T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAACTCGAGTTT
AAAAAATCGATAAT
 A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAAACTCGAGTTT
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GAAACTCGAGTTT
CGTATCGAAACCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAACTCGAGTTT
GCAAAACATTACTA-
 A C G T A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAAACTCGAGTTT
GWAAYHTGABMC-
 T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAACTCGAGTTT
AGAAACGAAAGT--
 A C G T T A C G C G T A C G T A C G T A T A G C C G A T G T A C C A T G C G T A A C T G C G A T C G A T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T