Information for 10-GCCTCTGTCTCTT (Motif 13)

A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G T G C A A C T G G T C A A G T C C G T A A C T G C G T A A C T G C T A G A G T C
p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.2 +/- 23.9bp
Average Position of motif in Background46.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCTGTCTCTT-
ANTCCTTTGTCTNNNN
 A C G T A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTCTGTCTCTT
-GCTCGGSCTC--
 A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCTGTCTCTT
TGCCTGAGGCN---
 A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCTGTCTCTT
NGCCTNAGGCN---
 A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTCTGTCTCTT
-CCTTTGTTTT--
 A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTCTGTCTCTT---
-TCACTTTCACTTTCN
 A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCTCTGTCTCTT
ATTGCCTCAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCTCTGTCTCTT--
---ACTTTCACTTTC
 A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCTCTGTCTCTT
-TGTCTGDCACCT
 A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCTGTCTCTT
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T