Information for 8-GCCAGGACTCTCC (Motif 12)

A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
Reverse Opposite:
C A T G A T C G C G T A A C T G T C G A T A C G C A G T A T G C A G T C A C G T A T C G T A C G A T G C
p-value:1e-10
log p-value:-2.411e+01
Information Content per bp:1.789
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets63.7 +/- 27.8bp
Average Position of motif in Background50.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCAGGACTCTCC
-CNAGGCCT----
 A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGACTCTCC--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCAGGACTCTCC
-CTAGGCCT----
 A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCAGGACTCTCC
-VCAGGTRDRY--
 A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGACTCTCC
CGTGCCAAG-------
 A C G T A C G T A C G T A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCAGGACTCTCC---
--CAGGCCNNGGCCNN
 A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCCAGGACTCTCC
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGACTCTCC
TGCCAA--------
 A C G T A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGACTCTCC
ATGCCAGACN-----
 A C G T A C G T A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCAGGACTCTCC
CACAGN-------
 A T C G A G T C A T G C C G T A A C T G A T C G G C T A A T G C A G C T A G T C A C G T A T G C G A T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T