Information for 5-ARMMRCCCAGARMRCA (Motif 9)

C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A G C T A C G T
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.7 +/- 10.4bp
Average Position of motif in Background59.5 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ARMMRCCCAGARMRCA
-ATTTCCCAGVAKSCY
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ARMMRCCCAGARMRCA---
---TACCCACAATGCATTG
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ARMMRCCCAGARMRCA
---TGCCCAGNHW---
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ARMMRCCCAGARMRCA
TGAATTCCTAGAAAGCA
 A C G T C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ARMMRCCCAGARMRCA--
-CAAATCCAGACATCACA
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ARMMRCCCAGARMRCA
---ATGCCAGACN---
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ARMMRCCCAGARMRCA
------CCAGACAG--
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ARMMRCCCAGARMRCA
---TGCCCTGAGGGCA
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ARMMRCCCAGARMRCA
-GNNACCGAGAATNNN
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ARMMRCCCAGARMRCA
---TGCCCNNAGGGCA
 C G T A C T G A G T C A T G A C C T A G A G T C A G T C A G T C C G T A A C T G C G T A C T A G G T C A C T A G A G T C C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A