Information for 2-TRRYSAKGGGMGTTCA (Motif 5)

A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C T G A A G T C A C G T A G T C A G T C A G T C G T A C A C G T A T G C T C G A A G C T A G T C C G T A
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 25.6bp
Average Position of motif in Background59.6 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA
------GGGGATTTCC
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA-
-----NGGGGATTTCCC
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TRRYSAKGGGMGTTCA---
--NNNTNGGGCGTATNNTN
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA
------GGGGATTTCC
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA
--------AGRGGTCA
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA----
---GCTGGGGGGTACCCCTT
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TRRYSAKGGGMGTTCA
AAGGTCACGAAAGGTCA
 A C G T A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TRRYSAKGGGMGTTCA
------GGGAATTTCC
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TRRYSAKGGGMGTTCA---
---NTNTGGGGGGTCNNNA
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TRRYSAKGGGMGTTCA-
-NNTNAGGGGCGGNNNN
 A C G T C T A G C T G A A G C T A T C G C G T A A C T G C T A G A C T G A C T G G T C A A C T G A G C T A C G T A G T C C G T A A C G T
A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T