Information for 2-CTRCWCCACAWTGGMA (Motif 6)

A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
Reverse Opposite:
A C G T C A T G G A T C A T G C C G T A G C T A C G A T A C T G G C A T A C T G A C T G C G A T A T C G A G C T C G T A A C T G
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.4 +/- 31.2bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTRCWCCACAWTGGMA
------GACAATGNN-
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTRCWCCACAWTGGMA---
--NNTNNACAATGGGANNN
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTRCWCCACAWTGGMA
-NWAACCACADNN---
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTRCWCCACAWTGGMA
---ATCCAC-------
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTRCWCCACAWTGGMA
TGCCTGCGYCMCCTT----
 A C G T A C G T A C G T A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTRCWCCACAWTGGMA--
--AATGAACAATGGAATT
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A A C G T A C G T
A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTRCWCCACAWTGGMA-
--CTCACACAATGGCGC
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTRCWCCACAWTGGMA--
CTGNNNNNNNCAGATAAG
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A A C G T A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTRCWCCACAWTGGMA
----VRAACAATGG--
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CTRCWCCACAWTGGMA-----
------AACAATGNTATTGTT
 A G T C A C G T C T G A A T G C C G T A T A G C A G T C C G T A A G T C C G T A C G A T A C G T A T C G C A T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T