Information for 4-TCAGAAGGGA (Motif 18)

A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A C G T A G T C A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.8 +/- 27.5bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAGGGA-
CACAGCAGGGGG
 A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAAGGGA
DCTCAGCAGG--
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAAGGGA---
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAGAAGGGA---
-CGGAAGTGAAAC
 A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAGAAGGGA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAGGGA--
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAGAAGGGA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAGGGA
NGTCCCNNGGGA
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGAAGGGA----
GGAGAAAGGTGCGA
 A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAAGGGA
TGAGTCAGCA----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A C T G A C T G C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T