Information for 10-GGTAGGAACAGCC (Motif 14)

A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C
Reverse Opposite:
C T A G A C T G A T G C C G A T A T C G A C G T A C G T A G T C A G T C A G C T C T G A G T A C A T G C
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.735
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.8 +/- 18.3bp
Average Position of motif in Background69.6 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GGTAGGAACAGCC
-CCAGGAACAG--
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGTAGGAACAGCC
---TGGAACAGMA
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGTAGGAACAGCC-----
---AGCAACAGCCGCACC
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTAGGAACAGCC----
-AGCGGCACACACGCAA
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGTAGGAACAGCC------
---NAGAACAGNCTGTNCT
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGTAGGAACAGCC
------CACAGN-
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGTAGGAACAGCC---
----GGACCACCCACG
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGTAGGAACAGCC-----
---VAGRACAKNCTGTBC
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGTAGGAACAGCC
---TGGAAAA---
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGTAGGAACAGCC-------
----AGNACANNNTGTNCTN
 A T C G C A T G G A C T C T G A C T A G A C T G T G C A T C G A A T G C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C