Information for 2-AGGCGCAATG (Motif 5)

T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G
Reverse Opposite:
A G T C C T G A A G C T C A G T A C T G A G T C C T A G G T A C T G A C A G C T
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.680
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif9.83%
Number of Background Sequences with motif1936.4
Percentage of Background Sequences with motif4.12%
Average Position of motif in Targets49.8 +/- 26.4bp
Average Position of motif in Background50.2 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCGCAATG---
GCCGCGCAGTGCGT
 A C G T T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGCAATG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGCGCAATG----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCAATG---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCGCAATG
TTTGGCGCCAAA
 A C G T A C G T T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGCGCAATG
-GGCGCGCT-
 T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGCGCAATG-
-VRRACAAWGG
 T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGCGCAATG-
-GGAACAAAGR
 T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCGCAATG
GGGAGGACNG
 T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGCGCAATG--
---GACAATGNN
 T C G A A C T G A C T G G A T C T C A G T G A C G T C A T C G A G A C T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G