Information for 5-CCGCTGTCACTGGGCG (Motif 17)

A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
Reverse Opposite:
A G T C A C T G A G T C A T G C A G T C C G T A A C T G A G C T A C T G C G T A A G T C C G T A A C T G A G T C C T A G A C T G
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 9.0bp
Average Position of motif in Background69.6 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGCTGTCACTGGGCG
--GCTGTCAA------
 A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTCACTGGGCG
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCGCTGTCACTGGGCG
--CCTGTCAA------
 A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTCACTGGGCG
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGCTGTCACTGGGCG
-VGCTGWCAVB-----
 A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGTCACTGGGCG
TGCAGCTGTCCCT-----
 A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCGCTGTCACTGGGCG
---NTGTCAN------
 A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTCACTGGGCG
AACTAGCTGTCAATAC---
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTCACTGGGCG
NNGCAGCTGTT--------
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTCACTGGGCG
TGACAGCTGTCA-------
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T A C T G A C G T A G T C C T G A G T A C A C G T A C T G A T C G A C T G A G T C T A C G
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T