Information for 4-AGAAGCCAGAAAG (Motif 6)

C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
Reverse Opposite:
G T A C A C G T A G C T A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T A T G C A C G T
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 18.3bp
Average Position of motif in Background33.5 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGAAGCCAGAAAG
--ATGCCAGACN-
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAGCCAGAAAG----
CAAATCCAGACATCACA
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAAGCCAGAAAG
--AAGCCATAAAA
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAAGCCAGAAAG-
ARGAGGMCAAAATGW
 A C G T C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAAGCCAGAAAG
--AAACCACAGAN
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAAGCCAGAAAG
AGGTGNCAGACAG
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGAAGCCAGAAAG
-----CCAGACAG
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAAGCCAGAAAG
--AAACCACANN-
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGAAGCCAGAAAG
TGACANARRCCAGRC--
 A C G T A C G T A C G T A C G T C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAAGCCAGAAAG----
-AGAGCCATAAAATTCG
 C G T A A T C G G T C A C G T A A C T G A G T C A G T C C G T A A C T G C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G