Information for 19-TTTACATTGG (Motif 40)

A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T A C T G A C G T C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.3 +/- 26.7bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTTACATTGG
TGTTTACTTAGG
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TTTACATTGG
TCCATGTTTACTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTTACATTGG--
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TTTACATTGG
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATTGG
ATATTTACATA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTACATTGG
TGTTTACTTT--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTACATTGG
TGTTTACTTT--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTTACATTGG
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTTACATTGG
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTACATTGG
BTVATTWGCATA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T