Information for 13-CAGACTACCTCAC (Motif 27)

A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A T C G A C T G A C G T C T G A A C T G A C G T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 24.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTACCTCAC
BCAGACWA------
 A C G T A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTACCTCAC
CCAGACRSVB----
 A C G T A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGACTACCTCAC
-----TACGTCAT
 A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGACTACCTCAC
------ACGTCA-
 A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTACCTCAC
CCAGACAG------
 A C G T A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGACTACCTCAC-
CATAAGACCACCATTAC
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGACTACCTCAC-
--GATGACGTCATC
 A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C A C G T
A C G T A C G T T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

Creb5/MA0840.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGACTACCTCAC-
--AATGACGTCACC
 A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C A C G T
A C G T A C G T T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGACTACCTCAC
--CACTTCCTCT-
 A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGACTACCTCAC--
ACATGCTACCTAATAC
 A C G T A G T C C G T A A C T G C G T A A G T C A G C T C G T A A G T C T A G C A C G T G T A C C G T A A G T C A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C