Information for 7-GCTGGCCACATBGCTG (Motif 13)

C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A T G C T C G A G T C A A C G T A C T G C G A T A C T G A C T G G T A C A G T C C G T A A C T G G T A C
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 16.7bp
Average Position of motif in Background37.4 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTGGCCACATBGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGCCACATBGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGCCACATBGCTG
NNGTATGTGCACATNNN--
 A C G T A C G T A C G T C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGCCACATBGCTG
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTGGCCACATBGCTG
---GGTCACATGAC--
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTGGCCACATBGCTG
---AAGCACATGG---
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTGGCCACATBGCTG
-NWAACCACADNN---
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCTGGCCACATBGCTG-
-------RCATTCCWGG
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTGGCCACATBGCTG
---GGTCACGTGGC--
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCACATBGCTG
--AAACCACAGAN---
 C A T G G T A C A C G T A C T G C A T G G T A C A G T C C G T A A G T C C G T A A C G T A C G T A T C G A T G C A C G T A C T G
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T