Information for 6-GGTTAATGGCTKWGCA (Motif 8)

C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G A T G T A C C G T A A T C G A G T C G T A C C G T A A C G T A C G T C T G A G T C A A G T C G A T C
p-value:1e-14
log p-value:-3.273e+01
Information Content per bp:1.788
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 24.6bp
Average Position of motif in Background70.2 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA
-GTTAATGGCC-----
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGTTAATGGCTKWGCA
-GKTAATGR-------
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAATGGCTKWGCA
NNAATTAATGACCNNN--
 A C G T A C G T C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA-
-----ATGACTCAGCAD
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGTTAATGGCTKWGCA
----GATGACTCAGCA
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C G T A C G T A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA
-NNTAATTANN-----
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T A C G T A C G T A C G T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGTTAATGGCTKWGCA----
-----ATGACTCAGCAATTT
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA
--TTAATTAN------
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA
--TTAATTAN------
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTTAATGGCTKWGCA
-NNTAATTANN-----
 C A T G A C T G A C G T G A C T C G T A C G T A A C G T A C T G T C A G A T G C C G A T A C T G C G T A T A C G A G T C C G T A
A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T