Information for 3-ACGCAGATTAGCA (Motif 7)

C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
Reverse Opposite:
A C G T T A C G A T G C A C G T C T G A C G T A A C G T A G T C A C G T C T A G A G T C T A C G C G A T
p-value:1e-14
log p-value:-3.275e+01
Information Content per bp:1.800
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 16.7bp
Average Position of motif in Background31.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
----GGATTAGC-
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
--NNGGATTAGN-
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGATTAGCA
TTGCCCGGATTAGG-
 A C G T A C G T C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
--GNGGATTAGN-
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
--ANAGATAAGAA
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACGCAGATTAGCA
AAGAGGATTAG--
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACGCAGATTAGCA
---RGGATTAR--
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACGCAGATTAGCA
---CAGATAAGGN
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
---CGGATTAN--
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACGCAGATTAGCA
---NAGATAAGNN
 C G T A A T G C T A C G A G T C C G T A A C T G G T C A C G A T A G C T C G T A A T C G A G T C G T C A
A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A