Information for 13-CTGGGCGGAA (Motif 39)

A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A T G C A C T G A G T C A G T C A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.7 +/- 28.3bp
Average Position of motif in Background63.7 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCGGAA
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCGGAA-
RGKGGGCGGAGC
 A C G T A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCGGAA----
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGGCGGAA--
--GGGCGGGACC
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGGGCGGAA--
BTKGGCGGGAAA
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCGGAA
NGCGTGGGCGGR-
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGGCGGAA---
---RCCGGAAGTD
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGGCGGAA---
---DCCGGAARYN
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGGCGGAA
CWGGCGGGAA
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGGCGGAA---
--GGGCGGGAAGG
 A G T C A C G T A C T G A C T G C T A G A G T C A T C G A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G