Information for 21-ACTGTAATAAAAA (Motif 33)

C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
Reverse Opposite:
A C G T A C G T A G C T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 29.0bp
Average Position of motif in Background39.9 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA10/MA0899.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ACTGTAATAAAAA
--GGTAATAAAAA
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACTGTAATAAAAA
---GTCATAAAAN
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTGTAATAAAAA---
TAGGTAATAAAATTCA
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ACTGTAATAAAAA
---GCAATAAAAA
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACTGTAATAAAAA
---GCAATAAAA-
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACTGTAATAAAAA--
AAAGGTAATAAAATTT
 A C G T C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTGTAATAAAAA----
AATGCAATAAAATTTAT
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACTGTAATAAAAA
---CCAATAAAAA
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTGTAATAAAAA---
-CCGTATTATAAACAA
 C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A A C G T A C G T A C G T
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGTAATAAAAA--
TAAGGTAATAAAATTA
 A C G T C G T A A G T C A C G T A C T G A C G T C T G A C G T A A G C T C G T A G T C A C T G A C G T A C G T A A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A